Search results - ORA - Oxford University Research Archive

1

Journal article

A novel serum metabolomic panel distinguishes IgG4-related sclerosing cholangitis from primary sclerosing cholangitis

Radford-Smith, DE, Selvaraj, EA, Peters, R, et al.
2022-02-21

2

Journal article

Monkeypox virus contamination in an office-based workplace environment

Gould, S, Spencer, A, Onianwa, O, et al.
2022-08-31

3

Journal article

A critique of the hypothesis that CA repeats are primary targets of neuronal MeCP2

Chhatbar, K, Connelly, J, Webb, S, et al.
2022-09-19

4

Journal article

Assessing the impact of a novel house design on the incidence of malaria in children in rural Africa: study protocol for a household-cluster randomized controlled superiority trial

Mshamu, S, Mmbando, A, Meta, J, et al.
2022-06-20

5

Journal article

Production of a high purity, C-tagged hepatitis B surface antigen fusion protein VLP vaccine for malaria expressed in Pichia pastoris under cGMP conditions

Mukhopadhyay, E, Brod, F, Angell-Manning, P, et al.
2022-07-22

6

Journal article

Comparison of statistical methods for the analysis of recurrent adverse events in the presence of non-proportional hazards and unobserved heterogeneity: a simulation study

Patson, N, Mukaka, M, Kazembe, L, et al.
2022-01-20

7

Journal article

Community seroprevalence and risk factors for SARS-CoV-2 infection in different subpopulations in Vellore, India, and their implications for future prevention

Dayanand, D, Irudhayanathan, I, Kundu, D, et al.
2021-12-27

8

Journal article

Effect of adverse events on non-adherence and study non-completion in malaria chemoprevention during pregnancy trial: A nested case control study

Patson, N, Mukaka, M, Peterson, I, et al.
2022-01-19

9

Journal article

Under the Mask: a film on tuberculosis at the Thai-Myanmar border

Delmas, MV, Soan, M, Khirikoekkong, N, et al.
2022-04-21

10

Journal article

Effect of patient-delivered household contact tracing and prevention for tuberculosis: a household cluster-randomised trial in Malawi

Kaswaswa, K, MacPherson, P, Kumwenda, M, et al.
2022-09-08

11

Journal article

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes

Karnaukhov, V, Paes, W, Woodhouse, IB, et al.
2022-12-20

12

Journal article

Biallelic TLR4 deficiency in humans

Capitani, M, Al-Shaibi, AA, Pandey, S, et al.
2022-11-30

13

Thesis

Exploring mammalian chromatin architecture and its impact on gene regulation

Long, HS
2022

14

Journal article

Accessory ESCRT-III proteins are conserved and selective regulators of Rab11a-exosome formation

Marie, PP, Fan, S-J, Mason, J, et al.
2023-03-05

15

Internet publication

A peek into Western Indian Ocean microbial richness: a pilot for a coral microbiome study

Wambua, S, Gourlé, H, de Villiers, EP, et al.
2019-11-04

16

Journal article

Impact of exposure to malaria and nutritional status on responses to the experimental malaria vaccine ChAd63 MVA ME-TRAP in 5-17 month-old children in Burkina Faso

Morter, R, Tiono, AB, Nébié, I, et al.
2022-12-02

17

Thesis

Predicting fluoroquinolone resistance in Mycobacterium tuberculosis

Brankin, AE
2023

18

Journal article

Brain injury in COVID-19 is associated with dysregulated innate and adaptive immune responses

Needham, EJ, Ren, AL, Digby, RJ, et al.
2022-09-06

19

Journal article

Human infection with a reassortment avian influenza A H3N8 virus: an epidemiological investigation study

Bao, P, Liu, Y, Zhang, X, et al.
2022-11-10

20

Journal article

Estimation of the impact of hospital-onset SARS-CoV-2 infections on length of stay in English hospitals using causal inference

Stimson, J, Pouwels, KB, Hope, R, et al.
2022-12-09

21

Journal article

Facilitating participation in clinical trials during pregnancy

Vousden, N, Haynes, R, Findlay, S, et al.
2023-02-06

22

Journal article

A global core outcome measurement set for snakebite clinical trials

Abouyannis, M, Esmail, H, Hamaluba, M, et al.
2023-01-18

23

Journal article

Incoming HIV virion-derived Gag Spacer Peptide 2 (p1) is a target of effective CD8+ T cell antiviral responses

Yang, H, Llano, A, Cedeño, S, et al.
2021-05-11

24

Journal article

Reply to Kaye and Belley, “Third-generation cephalosporin-resistant Enterobacterales are critical priority pathogens, too!”

Butler, MS, Gigante, V, Sati, H, et al.
2022-03-24

25

Thesis

Data quality in health research: the development of methods to improve the assessment of temporal data quality in electronic health records

Quan, TP
2022

26

Journal article

Nilabh Shastri – Towards understanding classical and non-classical MHC-I antigen processing and presentation

Kessler, BM
2022-11-08

27

Journal article

Structure, mechanism, and inhibition of Hedgehog acyltransferase

Coupland, CE, Andrei, SA, Ansell, TB, et al.
2021-12-09

28

Journal article

Definitions matter: heterogeneity of COVID-19 disease severity criteria and incomplete reporting compromise meta-analysis

Guérin, PJ, McLean, ARD, Rashan, S, et al.
2022-07-19

29

Journal article

Methaemoglobinaemia and the radical curative efficacy of 8-aminoquinoline antimalarials

White, NJ, Watson, JA, Baird, JK
2022-01-27

30

Journal article

Characterizing SARS-CoV-2 viral clearance kinetics to improve the design of antiviral pharmacometric studies

Watson, JA, Kissler, SM, Day, NPJ, et al.
2022-06-23

31

Journal article

Higher-dose primaquine to prevent relapse of Plasmodium vivax malaria

Watson, JA, White, NJ
2022-07-21

32

Journal article

Tertiary and quaternary structure organization in gmp synthetases: implications for catalysis

Ballut, L, Violot, S, Galisson, F, et al.
2022-06-23

33

Journal article

Paediatric COVID-19 mortality: a database analysis of the impact of health resource disparity

Miranda Marwali, E, Kekilah, A, Yuliarto, S, et al.
2022-10-27

34

Journal article

T cells discriminate between groups C1 and C2 HLA-C

Sim, MJW, Stotz, Z, Lu, J, et al.
2022-05-19

35

Journal article

A time-course comparative clinical and immune response evaluation study between the human pathogenic Orientia tsutsugamushi strains: Karp and Gilliam in a rhesus macaque (Macaca mulatta) model

Inthawong, M, Sunyakumthorn, P, Wongwairot, S, et al.
2022-08-04

36

Journal article

Primary and secondary functions of HLA-E are determined by stability and conformation of the peptide-bound complexes

Walters, LC, Rozbesky, D, Harlos, K, et al.
2022-06-14

37

Journal article

Severe malaria

White, NJ
2022-10-06

38

Journal article

Identifying context-specific domains for assessing antimicrobial stewardship programmes in Asia: protocol for a scoping review

Vu, HTL, Hamers, RL, Limato, R, et al.
2022-09-15

39

Journal article

Health system preparedness for COVID-19 and its impacts on frontline health-care workers in Nepal: a qualitative study among frontline health-care workers and policy-makers

Shrestha, N, Mishra, SR, Ghimire, S, et al.
2021-06-18

40

Thesis

Functional analysis of the African swine fever virus MGF360 and MGF505 proteins, and its application to vaccine development

Connell, S
2021

41

Journal article

A qualitative study of barriers to antimicrobial stewardship in Indonesian hospitals: governance, competing interests, cost, and structural vulnerability

Limato, R, Broom, A, Nelwan, EJ, et al.
2022-06-14

42

Journal article

Blood culture utilization and epidemiology of antimicrobial-resistant bloodstream infections before and during the COVID-19 pandemic in the Indonesian national referral hospital

Sinto, R, Lie, KC, Setiati, S, et al.
2022-05-19

43

Journal article

Stopping prereferral rectal artesunate - a grave error

Watson, JA, Warsame, M, Peto, TJ, et al.
2022-07-13

44

Journal article

Pandemic inequity in a megacity: a multilevel analysis of individual, community and healthcare vulnerability risks for COVID-19 mortality in Jakarta, Indonesia

Surendra, H, Salama, N, Lestari, KD, et al.
2022-06-21

45

Journal article

Preparing for pandemics: a systematic review of pandemic influenza clinical management guidelines

Rigby, I, Michelen, M, Cheng, V, et al.
2022-11-07

46

Journal article

Post-COVID-19 condition 3 months after hospitalisation with SARS-CoV-2 in South Africa: a prospective cohort study

Dryden, M, Mudara, C, Vika, C, et al.
2022-09-01

47

Journal article

Extended coagulation profile of children with Long Covid: a prospective study

Di Gennaro, L, Valentini, P, Sorrentino, S, et al.
2022-11-01

48

Journal article

The diagnostic accuracy of rapid diagnostic tests for Ebola virus disease: a systematic review

Dagens, AB, Rojek, A, Sigfrid, L, et al.
2022-09-23

49

Journal article

Profiling of humoral immune responses to norovirus in children across Europe

Villabruna, N, Izquierdo-Lara, RW, Schapendonk, CME, et al.
2022-08-22

50

Journal article

Developing a priority global research agenda for antimicrobial resistance in the human health sector: protocol for a scoping review

Hamers, RL, Cassini, A, Asadinia, KS, et al.
2022-06-02

51

Journal article

Evaluating saliva sampling with reverse transcription loop-mediated isothermal amplification to improve access to SARS-CoV-2 diagnosis in low-resource settings

Suwarti, S, Zanjabila, S, Bonifacius, et al.
2022-07-05

52

Journal article

Pharmacokinetic considerations in seasonal malaria chemoprevention

Chotsiri, P, White, NJ, Tarning, J
2022-06-07

53

Journal article

Excess mortality attributable to hospital-acquired antimicrobial-resistant infections: a 2-year prospective surveillance study in Northeast Thailand

Lim, C, Teparrukkul, P, Nuntalohit, S, et al.
2022-06-20

54

Journal article

Mechanistic modeling of primaquine pharmacokinetics, gametocytocidal activity, and mosquito infectivity

Chotsiri, P, Mahamar, A, Hoglund, RM, et al.
2022-01-22

55

Conference item

Multimodal PET/CT tumour segmentation and prediction of progression-free survival using a full-scale UNet with attention

Bourigault, E, McGowan, DR, Mehranian, A, et al.
2022-03-13

56

Journal article

Modelling the optimal dosing schedule for artemether-lumefantrine chemoprophylaxis against malaria

Tarning, J, von Seidlein, L, Dondorp, AM, et al.
2022-10-02

57

Journal article

Simultaneous and enantiospecific quantification of primaquine and carboxyprimaquine in human plasma using liquid chromatography-tandem mass spectrometry

Hanpithakpong, W, Day, NPJ, White, NJ, et al.
2022-06-03

58

Journal article

Air and surface sampling for monkeypox virus in a UK hospital: an observational study

Gould, S, Atkinson, B, Onianwa, O, et al.
2022-10-07

59

Journal article

Genomic sequencing from sputum for tuberculosis disease diagnosis, lineage determination and drug susceptibility prediction

Nilgiriwala, K, Rabodoarivelo, M-S, Hall, MB, et al.
2023-02-23

60

Journal article

Development and validation of personalised risk prediction models for early detection and diagnosis of primary liver cancer among the English primary care population using the QResearch® database: research protocol and statistical analysis plan

Liao, W, Jepsen, P, Coupland, C, et al.
2022-10-20

61

Journal article

Continuous population-level monitoring of SARS-CoV-2 seroprevalence in a large metropolitan region

Emmenegger, M, Cecco, ED, Lamparter, D, et al.
2023-01-04

62

Journal article

Germline variant testing in serrated polyposis syndrome

Murphy, A, Solomons, J, Risby, P, et al.
2022-02-18

63

Journal article

Multicentre derivation and validation of a colitis-associated colorectal cancer risk prediction web tool

Curtius, K, Kabir, M, Al Bakir, I, et al.
2021-05-14

64

Thesis

Interplay between oxygen sensing mechanisms and hepatitis B virus replication

Liu, PJ
2021

65

Journal article

Distinct glycosylation and functional profile of typhoid vaccine-induced antibodies in a UK challenge study and Nepalese children

Stockdale, LK, de Haan, N, Hill, J, et al.
2022-11-01

66

Thesis

An aptamer-based sensor for the detection of antimalarial drugs

Coonahan, E
2019

67

Journal article

Persistence of the immune response after two doses of ChAdOx1 nCov-19 (AZD1222): 1 year of follow up of two randomised controlled trials

Voysey, M, Flaxman, A, Aboagye, J, et al.
2023-02-02

68

Journal article

Strategies for improving mental health and wellbeing used by adults ageing with HIV: a qualitative exploration

Mwangala, P, Wagner, R, Newton, C, et al.
2022-08-26

69

Journal article

Faecal immunochemical testing (FIT) in patients with signs or symptoms of suspected colorectal cancer (CRC): a joint guideline from the Association of Coloproctology of Great Britain and Ireland (ACPGBI) and the British Society of Gastroenterology (BSG)

Monahan, KJ, Davies, MM, Abulafi, M, et al.
2022-07-12

70

Journal article

Low-dose IL-2 reduces IL-21+ T cell frequency and induces anti-inflammatory gene expression in type 1 diabetes

Zhang, J-Y, Hamey, F, Trzupek, D, et al.
2022-11-28

71

Journal article

Pan-cancer analysis of tissue and single-cell HIF-pathway activation using a conserved gene signature

Lombardi, O, Li, R, Halim, S, et al.
2022-11-15

72

Journal article

The burden of bacterial antimicrobial resistance in the WHO European region in 2019: a cross-country systematic analysis

Mestrovic, T, Robles Aguilar, G, Swetschinski, LR, et al.
2022-10-13

73

Journal article

An international observational study to assess the impact of the Omicron variant emergence on the clinical epidemiology of COVID-19 in hospitalised patients.

Gonçalves, BP, Hall, M, Jassat, W, et al.
2022-10-05

74

Journal article

Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey

Keating, P, Murray, J, Schenkel, K, et al.
2021-09-25

75

Dataset

Equity and inclusivity in research funding: barriers and delivering change

Gladstone, J, Schipper, L, Hara-Msulira, T, et al.
2023

76

Journal article

Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction

Sanderson, N, Kapel, N, Rodger, G, et al.
2023-01-10

77

Journal article

Impact of dolutegravir-based antiretroviral therapy on piperaquine exposure following dihydroartemisinin-piperaquine intermittent preventive treatment of malaria in pregnant women living with HIV

Banda, CG, Nkosi, D, Allen, E, et al.
2022-11-14

78

Conference item

Early detection of oesophageal cancer through colour contrast enhancement for data augmentation

Gao, X, Taylor, S, Pang, W, et al.
2022-04-04

79

Journal article

Rosetting responses of Plasmodium-infected erythrocytes to antimalarials

Lee, W-C, Russell, B, Lau, Y-L, et al.
2022-04-11

80

Conference item

A chemogenomic HTS for combinatorial drug discovery in glioblastoma

Johanssen, T, Hatch, SB, Anthanasiadis, P, et al.
2022

81

Journal article

Single-molecule tracking of perfringolysin O assembly and membrane insertion uncoupling

Senior, MJT, Monico, C, Weatherill, EE, et al.
2022-09-19

82

Conference item

Alzheimer’s disease drug discovery: targeting Dickkopf-1 induction of the Wnt-PCP non-canonical pathway

Johanssen, T, Wren, SP, Woffindale, C, et al.
2017-07-12

83

Dataset

Deep Antimicrobial Susceptibility Phenotyping (DASP) Training and Evaluation Dataset, and Trained Models.

Zagajewski, A, Turner, P, Feehily, C, et al.
2023

84

Conference item

The main pathogens causing febrile illness and implications for fever management in Laos; results from the Fiebre study

Luangraj, M, Phimolnsarnnousith, V, Singhaxaiyaseng, S, et al.
2021-11-03

85

Journal article

HAYSTAC: A Bayesian framework for robust and rapid species identification in high-throughput sequencing data

Dimopoulos, EA, Carmagnini, A, Velsko, IM, et al.
2022-09-30

86

Journal article

Orientia tsutsugamushi in chiggers and small mammals in Laos

Elliott, I, Kumlert, R, Thangnimitchok, N, et al.
2022-10-06

87

Journal article

An evaluation of global Chikungunya clinical management guidelines: a systematic review

Webb, E, Michelen, M, Rigby, I, et al.
2022-09-28

88

Thesis

Impact of a VI-polysaccharide conjugate vaccine in preventing Typhoid Fever in an endemic setting, Lalitpur, Nepal

Shakya, M
2022

89

Journal article

Tecovirimat for monkeypox in Central African Republic under expanded access

Mbrenga, F, Nakouné, E, Malaka, C, et al.
2022-11-30

90

Internet publication

Structural basis for antagonism of the ubiquitin ligase BIRC6 by SMAC

Dietz, L, Ellison, CJ, Riechmann, C, et al.
2022-08-30

91

Internet publication

Structural premise of selective deubiquitinase USP30 inhibition by small-molecule benzosulfonamides

O'Brien, DP, Jones, HBL, Guenther, F, et al.
2022-10-17

92

Internet publication

Poor antibody responses to SARS-CoV-2 infection or vaccination are associated with high re-infection rates in haemodialysis and renal transplant patients

Shankar, S, Beckett, J, Tipton, T, et al.
2021-10-13

93

Journal article

The prognostic utility of soluble fms-like tyrosine kinase-1 (sFlt-1) and placental growth factor (PIGF) biomarkers for predicting preeclampsia: a secondary analysis of data from the INSPIRE trial

Kifle, MM, Dahal, P, Vatish, M, et al.
2022-06-27

94

Journal article

Trial Forge Guidance 3: randomised trials and how to recruit and retain individuals from ethnic minority groups-practical guidance to support better practice.

Dawson, S, Banister, K, Biggs, K, et al.
2022-08-17

95

Journal article

A Bayesian reanalysis of the Standard versus Accelerated Initiation of Renal-Replacement Therapy in Acute Kidney Injury (STARRT-AKI) trial

Zampieri, FG, da Costa, BR, Vaara, ST, et al.
2022-08-25

96

Journal article

The roles of physician associates and advanced nurse practitioners in the National Health Service in the UK: a scoping review and narrative synthesis

Wang, H, English, M, Chakma, S, et al.
2022-09-15

97

Journal article

Chronic inflammatory arthritis drives systemic changes in circadian energy metabolism

Downton, P, Sanna, F, Maidstone, R, et al.
2022-04-28

98

Journal article

Relationship of circulating Plasmodium falciparum lifecycle stage to circulating parasitemia and total parasite biomass

Duffy, MF, Tonkin-Hill, GQ, Trianty, L, et al.
2022-09-23

99

Journal article

IFITM3 restricts virus-induced inflammatory cytokine production by limiting Nogo-B mediated TLR responses

Clement, M, Forbester, JL, Marsden, M, et al.
2022-09-08

100

Journal article

Inflammatory gene expression associates with hepatitis B virus cccDNA- but not integrant-derived transcripts in HBeAg negative disease

Magri, A, Harris, JM, D'Arienzo, V, et al.
2022-05-17