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A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages

Abstract:

Since the start of the COVID-19 pandemic, an unprecedented number of genomic sequences of SARS-CoV-2 have been generated and shared with the scientific community. The unparalleled volume of available genetic data presents a unique opportunity to gain real-time insights into the virus transmission during the pandemic, but also a daunting computational hurdle if analyzed with gold-standard phylogeographic approaches. To tackle this practical limitation, we here describe and apply a rapid analyt...

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Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1093/molbev/msaa284

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Role:
Author
ORCID:
0000-0001-6354-4943
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Publisher:
Oxford University Press Publisher's website
Journal:
Molecular Biology and Evolution Journal website
Volume:
38
Issue:
4
Pages:
1608–1613
Publication date:
2020-11-03
Acceptance date:
2020-11-01
DOI:
EISSN:
1537-1719
ISSN:
0737-4038
Pmid:
33316043
Language:
English
Keywords:
Pubs id:
1160235
Local pid:
pubs:1160235
Deposit date:
2021-02-11

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