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sensiPhy: an R-package for sensitivity analysis in phylogenetic comparative methods

Abstract:

1.Biological conclusions drawn from phylogenetic comparative methods can be sensitive to uncertainty in species sampling, phylogeny and data. To be confident about our conclusions, we need to quantify their robustness to such uncertainty. 2.We present sensiPhy, an R-package to easily and rapidly perform sensitivity analysis for phylogenetic comparative methods. sensiPhy allows researchers to evaluate the sampling effort, detect influential species and clades, assess phylogenetic uncertainty ...

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Publication status:
Published
Peer review status:
Peer reviewed

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Publisher copy:
10.1111/2041-210X.12990

Authors


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Institution:
University of Oxford
Division:
MPLS Division
Department:
RB Balliol College
Oxford college:
Balliol College
Role:
Author
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Funding agency for:
Werner, G
Grant:
Newton International Fellowship
Publisher:
Wiley Publisher's website
Journal:
Methods in Ecology and Evolution Journal website
Volume:
9
Issue:
6
Pages:
1461-1467
Publication date:
2018-03-26
Acceptance date:
2018-02-15
DOI:
ISSN:
2041-210X
Source identifiers:
826746
Keywords:
Pubs id:
pubs:826746
UUID:
uuid:79d7da62-d31e-4ea8-aa26-b0e74d0b3ff5
Local pid:
pubs:826746
Deposit date:
2018-02-26

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